Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK7P50613 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDK7P50613 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.68■□□□□ 0.42
CDK7P50613 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDK7P50613 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CDK7P50613 HAUS4P1-201ENST00000406739 1145 ntBASIC17.68■□□□□ 0.42
CDK7P50613 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CDK7P50613 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.68■□□□□ 0.42
CDK7P50613 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK7P50613 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDK7P50613 AC244093.1-201ENST00000610837 814 ntBASIC17.68■□□□□ 0.42
CDK7P50613 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
CDK7P50613 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 AC011676.5-201ENST00000624864 2660 ntBASIC17.68■□□□□ 0.42
CDK7P50613 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CDK7P50613 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK7P50613 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.68■□□□□ 0.42
CDK7P50613 AL162727.3-201ENST00000635661 2787 ntBASIC17.68■□□□□ 0.42
CDK7P50613 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.67■□□□□ 0.42
CDK7P50613 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK7P50613 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK7P50613 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK7P50613 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDK7P50613 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK7P50613 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
CDK7P50613 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK7P50613 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 FAM21FP-201ENST00000426241 1131 ntBASIC17.67■□□□□ 0.42
CDK7P50613 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK7P50613 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.67■□□□□ 0.42
CDK7P50613 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CDK7P50613 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK7P50613 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK7P50613 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK7P50613 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDK7P50613 AL603756.1-201ENST00000606511 2163 ntBASIC17.67■□□□□ 0.42
CDK7P50613 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDK7P50613 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDK7P50613 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK7P50613 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK7P50613 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDK7P50613 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 TOMM22P5-201ENST00000416399 439 ntBASIC17.66■□□□□ 0.42
CDK7P50613 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 TARDBPP1-201ENST00000442013 1203 ntBASIC17.66■□□□□ 0.42
CDK7P50613 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.66■□□□□ 0.42
CDK7P50613 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.66■□□□□ 0.42
CDK7P50613 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 AC068587.3-201ENST00000526613 355 ntBASIC17.66■□□□□ 0.42
CDK7P50613 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 PTP4A1P2-201ENST00000546033 454 ntBASIC17.66■□□□□ 0.42
CDK7P50613 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 AC124283.3-201ENST00000570869 594 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms