Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.4■□□□□ 0.06
PRIM2P49643 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 OR2I1P-209ENST00000641730 5365 ntBASIC15.4■□□□□ 0.06
PRIM2P49643 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 MYO15B-237ENST00000642007 4893 ntBASIC15.4■□□□□ 0.06
PRIM2P49643 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.4■□□□□ 0.06
PRIM2P49643 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.4■□□□□ 0.06
PRIM2P49643 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRIM2P49643 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.39■□□□□ 0.05
PRIM2P49643 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 AC112504.1-201ENST00000623415 1841 ntBASIC15.39■□□□□ 0.05
PRIM2P49643 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PRIM2P49643 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.39■□□□□ 0.05
PRIM2P49643 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.39■□□□□ 0.05
PRIM2P49643 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.39■□□□□ 0.05
PRIM2P49643 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.39■□□□□ 0.05
PRIM2P49643 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
PRIM2P49643 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 AC025580.3-201ENST00000617932 1424 ntBASIC15.39■□□□□ 0.05
PRIM2P49643 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PRIM2P49643 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.39■□□□□ 0.05
PRIM2P49643 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PRIM2P49643 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 AP003680.1-201ENST00000598970 3660 ntBASIC15.39■□□□□ 0.05
PRIM2P49643 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRIM2P49643 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.38■□□□□ 0.05
PRIM2P49643 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.38■□□□□ 0.05
PRIM2P49643 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 AC007967.2-201ENST00000432613 625 ntBASIC15.38■□□□□ 0.05
PRIM2P49643 AC140658.5-201ENST00000438532 169 ntBASIC15.38■□□□□ 0.05
PRIM2P49643 KRT18P34-201ENST00000488218 1270 ntBASIC15.38■□□□□ 0.05
PRIM2P49643 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 RNA5SP416-201ENST00000516838 111 ntBASIC15.38■□□□□ 0.05
PRIM2P49643 AC018845.2-201ENST00000568326 409 ntBASIC15.38■□□□□ 0.05
PRIM2P49643 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
PRIM2P49643 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRIM2P49643 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.38■□□□□ 0.05
PRIM2P49643 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms