Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1DP48730 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1DP48730 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.05■□□□□ 0.16
CSNK1DP48730 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1DP48730 FAM8A3P-201ENST00000427218 844 ntBASIC16.05■□□□□ 0.16
CSNK1DP48730 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1DP48730 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.05■□□□□ 0.16
CSNK1DP48730 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1DP48730 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1DP48730 AC135586.1-201ENST00000539323 574 ntBASIC16.05■□□□□ 0.16
CSNK1DP48730 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.05■□□□□ 0.16
CSNK1DP48730 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1DP48730 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1DP48730 AC092364.2-202ENST00000597012 1073 ntBASIC16.05■□□□□ 0.16
CSNK1DP48730 AC004461.2-201ENST00000629517 803 ntBASIC16.05■□□□□ 0.16
CSNK1DP48730 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1DP48730 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CSNK1DP48730 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSNK1DP48730 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1DP48730 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1DP48730 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1DP48730 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CSNK1DP48730 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 RPL13P2-201ENST00000440687 659 ntBASIC16.04■□□□□ 0.16
CSNK1DP48730 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.04■□□□□ 0.16
CSNK1DP48730 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1DP48730 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.04■□□□□ 0.16
CSNK1DP48730 MIR4745-201ENST00000577608 62 ntBASIC16.04■□□□□ 0.16
CSNK1DP48730 MIR4313-201ENST00000580760 101 ntBASIC16.04■□□□□ 0.16
CSNK1DP48730 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1DP48730 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1DP48730 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1DP48730 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1DP48730 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1DP48730 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1DP48730 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1DP48730 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1DP48730 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1DP48730 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.03■□□□□ 0.16
CSNK1DP48730 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1DP48730 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 AC074338.1-201ENST00000416825 156 ntBASIC16.03■□□□□ 0.16
CSNK1DP48730 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.03■□□□□ 0.16
CSNK1DP48730 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 RN7SL204P-201ENST00000582831 262 ntBASIC16.03■□□□□ 0.16
CSNK1DP48730 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1DP48730 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1DP48730 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1DP48730 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.02■□□□□ 0.16
CSNK1DP48730 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1DP48730 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.02■□□□□ 0.16
CSNK1DP48730 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CSNK1DP48730 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1DP48730 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.02■□□□□ 0.16
CSNK1DP48730 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1DP48730 AC018892.3-201ENST00000623986 2499 ntBASIC16.02■□□□□ 0.16
CSNK1DP48730 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1DP48730 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1DP48730 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
CSNK1DP48730 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms