Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC004835.2-201ENST00000603762 682 ntBASIC14.36□□□□□ -0.11
CSNK1A1P48729 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 MIR600HG-201ENST00000449175 5984 ntBASIC14.35□□□□□ -0.11
CSNK1A1P48729 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AL627223.1-201ENST00000416693 442 ntBASIC14.35□□□□□ -0.11
CSNK1A1P48729 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AC084121.4-201ENST00000641598 221 ntBASIC14.35□□□□□ -0.11
CSNK1A1P48729 AF228730.8-201ENST00000642140 221 ntBASIC14.35□□□□□ -0.11
CSNK1A1P48729 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1A1P48729 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 AL365203.3-201ENST00000609742 2057 ntBASIC14.35□□□□□ -0.11
CSNK1A1P48729 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1A1P48729 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AC010491.1-201ENST00000563101 2797 ntBASIC14.34□□□□□ -0.11
CSNK1A1P48729 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.34□□□□□ -0.11
CSNK1A1P48729 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AP001282.1-201ENST00000531301 1499 ntBASIC14.34□□□□□ -0.11
CSNK1A1P48729 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms