Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 AL353732.1-201ENST00000569618 1459 ntBASIC13.94□□□□□ -0.18
CBX5P45973 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.94□□□□□ -0.18
CBX5P45973 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CBX5P45973 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CBX5P45973 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.94□□□□□ -0.18
CBX5P45973 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 TSSC2-201ENST00000450217 709 ntBASIC13.94□□□□□ -0.18
CBX5P45973 TOB2P1-201ENST00000469761 992 ntBASIC13.94□□□□□ -0.18
CBX5P45973 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.94□□□□□ -0.18
CBX5P45973 TPSP2-201ENST00000561760 610 ntBASIC13.94□□□□□ -0.18
CBX5P45973 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.94□□□□□ -0.18
CBX5P45973 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 AL139424.1-201ENST00000607572 797 ntBASIC13.94□□□□□ -0.18
CBX5P45973 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CBX5P45973 REXO1L3P-201ENST00000622202 1288 ntBASIC13.94□□□□□ -0.18
CBX5P45973 AL121956.5-201ENST00000625261 221 ntBASIC13.94□□□□□ -0.18
CBX5P45973 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 AC016027.1-202ENST00000607927 1699 ntBASIC13.94□□□□□ -0.18
CBX5P45973 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
CBX5P45973 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 AP002414.2-201ENST00000591780 3365 ntBASIC13.94□□□□□ -0.18
CBX5P45973 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.94□□□□□ -0.18
CBX5P45973 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CBX5P45973 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.93□□□□□ -0.18
CBX5P45973 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.93□□□□□ -0.18
CBX5P45973 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.93□□□□□ -0.18
CBX5P45973 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CBX5P45973 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CBX5P45973 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CBX5P45973 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.93□□□□□ -0.18
CBX5P45973 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CBX5P45973 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.93□□□□□ -0.18
CBX5P45973 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.93□□□□□ -0.18
CBX5P45973 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CBX5P45973 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.93□□□□□ -0.18
CBX5P45973 AC087641.1-201ENST00000557561 1021 ntBASIC13.93□□□□□ -0.18
CBX5P45973 AC092329.2-201ENST00000598402 547 ntBASIC13.93□□□□□ -0.18
CBX5P45973 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CBX5P45973 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.93□□□□□ -0.18
CBX5P45973 AL589182.2-201ENST00000619332 1049 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms