Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.09□□□□□ -0.15
GDNFP39905 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.09□□□□□ -0.15
GDNFP39905 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.09□□□□□ -0.15
GDNFP39905 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.09□□□□□ -0.15
GDNFP39905 TERC-201ENST00000602385 541 ntBASIC14.09□□□□□ -0.15
GDNFP39905 AL121912.1-201ENST00000603683 238 ntBASIC14.09□□□□□ -0.15
GDNFP39905 AL139424.1-201ENST00000607572 797 ntBASIC14.09□□□□□ -0.15
GDNFP39905 AC010654.1-201ENST00000615722 808 ntBASIC14.09□□□□□ -0.15
GDNFP39905 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.09□□□□□ -0.15
GDNFP39905 AL031008.1-201ENST00000619963 541 ntBASIC14.09□□□□□ -0.15
GDNFP39905 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.09□□□□□ -0.15
GDNFP39905 AC148477.8-201ENST00000624298 468 ntBASIC14.09□□□□□ -0.15
GDNFP39905 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 AC087481.3-201ENST00000602886 1894 ntBASIC14.09□□□□□ -0.15
GDNFP39905 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
GDNFP39905 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 AL359258.3-201ENST00000622910 2331 ntBASIC14.09□□□□□ -0.15
GDNFP39905 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GDNFP39905 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.09□□□□□ -0.15
GDNFP39905 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GDNFP39905 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.09□□□□□ -0.15
GDNFP39905 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDNFP39905 TOP3BP1-201ENST00000420768 1380 ntBASIC14.09□□□□□ -0.15
GDNFP39905 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDNFP39905 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDNFP39905 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GDNFP39905 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GDNFP39905 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDNFP39905 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
GDNFP39905 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.08□□□□□ -0.15
GDNFP39905 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.08□□□□□ -0.16
GDNFP39905 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 HNRNPDP1-201ENST00000439535 754 ntBASIC14.08□□□□□ -0.16
GDNFP39905 FAM197Y8-203ENST00000450145 560 ntBASIC14.08□□□□□ -0.16
GDNFP39905 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 RNPS1P1-201ENST00000507437 918 ntBASIC14.08□□□□□ -0.16
GDNFP39905 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.08□□□□□ -0.16
GDNFP39905 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.08□□□□□ -0.16
GDNFP39905 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.08□□□□□ -0.16
GDNFP39905 AC139887.3-201ENST00000568585 713 ntBASIC14.08□□□□□ -0.16
GDNFP39905 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 AL589182.2-201ENST00000619332 1049 ntBASIC14.08□□□□□ -0.16
GDNFP39905 AC004706.3-202ENST00000621574 984 ntBASIC14.08□□□□□ -0.16
GDNFP39905 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.08□□□□□ -0.16
GDNFP39905 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDNFP39905 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GDNFP39905 LINC01101-201ENST00000622953 1884 ntBASIC14.08□□□□□ -0.16
GDNFP39905 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDNFP39905 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
GDNFP39905 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDNFP39905 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDNFP39905 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GDNFP39905 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
GDNFP39905 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDNFP39905 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
GDNFP39905 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GDNFP39905 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDNFP39905 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.07□□□□□ -0.16
GDNFP39905 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms