Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT9P35527 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.64■□□□□ 0.41
KRT9P35527 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.64■□□□□ 0.41
KRT9P35527 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 AL591424.1-201ENST00000442569 1213 ntBASIC17.64■□□□□ 0.41
KRT9P35527 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.64■□□□□ 0.41
KRT9P35527 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT9P35527 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 AC027601.4-201ENST00000611259 610 ntBASIC17.64■□□□□ 0.41
KRT9P35527 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
KRT9P35527 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT9P35527 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT9P35527 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KRT9P35527 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT9P35527 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT9P35527 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT9P35527 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
KRT9P35527 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT9P35527 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
KRT9P35527 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 MED15P5-201ENST00000423150 992 ntBASIC17.63■□□□□ 0.41
KRT9P35527 AC093724.1-201ENST00000448659 1027 ntBASIC17.63■□□□□ 0.41
KRT9P35527 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT9P35527 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT9P35527 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT9P35527 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT9P35527 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 KRT19P2-202ENST00000557173 1012 ntBASIC17.63■□□□□ 0.41
KRT9P35527 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT9P35527 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
KRT9P35527 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KRT9P35527 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
KRT9P35527 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
KRT9P35527 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT9P35527 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 TMBIM7P-203ENST00000641617 1718 ntBASIC17.62■□□□□ 0.41
KRT9P35527 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT9P35527 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KRT9P35527 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT9P35527 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
KRT9P35527 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KRT9P35527 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT9P35527 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms