Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.44■□□□□ 0.22
SLC6A4P31645 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC6A4P31645 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 AC074338.1-201ENST00000416825 156 ntBASIC16.44■□□□□ 0.22
SLC6A4P31645 COX20P2-201ENST00000452636 358 ntBASIC16.44■□□□□ 0.22
SLC6A4P31645 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC6A4P31645 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC6A4P31645 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC6A4P31645 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 SRD5A3P1-201ENST00000603021 949 ntBASIC16.44■□□□□ 0.22
SLC6A4P31645 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 AC069224.1-201ENST00000566372 1715 ntBASIC16.44■□□□□ 0.22
SLC6A4P31645 Z97205.2-201ENST00000564697 1639 ntBASIC16.44■□□□□ 0.22
SLC6A4P31645 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC6A4P31645 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A4P31645 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A4P31645 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SLC6A4P31645 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A4P31645 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SLC6A4P31645 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SLC6A4P31645 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC6A4P31645 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A4P31645 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
SLC6A4P31645 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC6A4P31645 PHKG1P2-201ENST00000457537 863 ntBASIC16.43■□□□□ 0.22
SLC6A4P31645 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC6A4P31645 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A4P31645 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC6A4P31645 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 LINC01115-203ENST00000606068 577 ntBASIC16.43■□□□□ 0.22
SLC6A4P31645 AC004233.3-201ENST00000607794 1269 ntBASIC16.43■□□□□ 0.22
SLC6A4P31645 AC074044.1-201ENST00000609673 707 ntBASIC16.43■□□□□ 0.22
SLC6A4P31645 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.43■□□□□ 0.22
SLC6A4P31645 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.43■□□□□ 0.22
SLC6A4P31645 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SLC6A4P31645 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC6A4P31645 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A4P31645 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SLC6A4P31645 OR6D1P-203ENST00000641209 4860 ntBASIC16.43■□□□□ 0.22
SLC6A4P31645 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC6A4P31645 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC6A4P31645 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A4P31645 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A4P31645 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
SLC6A4P31645 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A4P31645 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC6A4P31645 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms