Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.67□□□□□ -0.22
VAMP1P23763 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.67□□□□□ -0.22
VAMP1P23763 AC145285.6-201ENST00000604632 637 ntBASIC13.67□□□□□ -0.22
VAMP1P23763 AP006294.2-201ENST00000641667 209 ntBASIC13.67□□□□□ -0.22
VAMP1P23763 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VAMP1P23763 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
VAMP1P23763 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VAMP1P23763 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VAMP1P23763 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VAMP1P23763 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VAMP1P23763 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.66□□□□□ -0.22
VAMP1P23763 AL645929.1-201ENST00000420084 975 ntBASIC13.66□□□□□ -0.22
VAMP1P23763 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.66□□□□□ -0.22
VAMP1P23763 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.66□□□□□ -0.22
VAMP1P23763 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.66□□□□□ -0.22
VAMP1P23763 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
VAMP1P23763 MIR4492-201ENST00000581627 80 ntBASIC13.66□□□□□ -0.22
VAMP1P23763 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.66□□□□□ -0.22
VAMP1P23763 HYMAI.1-201ENST00000620949 238 ntBASIC13.66□□□□□ -0.22
VAMP1P23763 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC13.66□□□□□ -0.22
VAMP1P23763 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.66□□□□□ -0.22
VAMP1P23763 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.66□□□□□ -0.22
VAMP1P23763 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 AC007292.2-201ENST00000593524 1812 ntBASIC13.66□□□□□ -0.22
VAMP1P23763 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
VAMP1P23763 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VAMP1P23763 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
VAMP1P23763 AL590787.1-201ENST00000568856 1315 ntBASIC13.65□□□□□ -0.22
VAMP1P23763 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
VAMP1P23763 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
VAMP1P23763 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 AC131009.4-201ENST00000624048 1740 ntBASIC13.65□□□□□ -0.22
VAMP1P23763 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
VAMP1P23763 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
VAMP1P23763 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
VAMP1P23763 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.65□□□□□ -0.22
VAMP1P23763 AC117947.1-201ENST00000427448 529 ntBASIC13.65□□□□□ -0.22
VAMP1P23763 AC092647.4-201ENST00000457211 535 ntBASIC13.65□□□□□ -0.22
VAMP1P23763 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.65□□□□□ -0.22
VAMP1P23763 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.65□□□□□ -0.22
VAMP1P23763 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.65□□□□□ -0.22
VAMP1P23763 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.65□□□□□ -0.22
VAMP1P23763 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VAMP1P23763 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms