Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.87■□□□□ 0.29
MMP8P22894 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP8P22894 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP8P22894 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP8P22894 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.87■□□□□ 0.29
MMP8P22894 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP8P22894 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 AL512356.2-201ENST00000546955 174 ntBASIC16.87■□□□□ 0.29
MMP8P22894 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP8P22894 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP8P22894 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 AL133215.2-201ENST00000609242 977 ntBASIC16.87■□□□□ 0.29
MMP8P22894 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.87■□□□□ 0.29
MMP8P22894 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
MMP8P22894 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP8P22894 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.87■□□□□ 0.29
MMP8P22894 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP8P22894 AC011270.2-201ENST00000624293 2550 ntBASIC16.86■□□□□ 0.29
MMP8P22894 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 AC020658.6-201ENST00000623564 1870 ntBASIC16.86■□□□□ 0.29
MMP8P22894 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MMP8P22894 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP8P22894 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.86■□□□□ 0.29
MMP8P22894 SPDYE17-201ENST00000412399 783 ntBASIC16.86■□□□□ 0.29
MMP8P22894 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 DNAJB3-202ENST00000449667 1266 ntBASIC16.86■□□□□ 0.29
MMP8P22894 PHKG1P2-201ENST00000457537 863 ntBASIC16.86■□□□□ 0.29
MMP8P22894 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 SNHG9-202ENST00000564014 471 ntBASIC16.86■□□□□ 0.29
MMP8P22894 AL450472.2-201ENST00000603663 1156 ntBASIC16.86■□□□□ 0.29
MMP8P22894 AC003101.2-201ENST00000612557 442 ntBASIC16.86■□□□□ 0.29
MMP8P22894 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
MMP8P22894 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP8P22894 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 AC092384.3-202ENST00000564646 2873 ntBASIC16.86■□□□□ 0.29
MMP8P22894 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
MMP8P22894 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP8P22894 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP8P22894 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MMP8P22894 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MMP8P22894 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP8P22894 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP8P22894 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
MMP8P22894 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.85■□□□□ 0.29
MMP8P22894 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 AL596442.2-201ENST00000610240 980 ntBASIC16.85■□□□□ 0.29
MMP8P22894 AC023511.2-201ENST00000618803 211 ntBASIC16.85■□□□□ 0.29
MMP8P22894 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
MMP8P22894 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP8P22894 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms