Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RARRES2P8-201ENST00000566335 367 ntBASIC17.54■□□□□ 0.4
RFX1P22670 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 AC073389.1-201ENST00000595595 795 ntBASIC17.54■□□□□ 0.4
RFX1P22670 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX1P22670 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.54■□□□□ 0.4
RFX1P22670 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFX1P22670 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFX1P22670 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RFX1P22670 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFX1P22670 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFX1P22670 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFX1P22670 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 AC007274.1-201ENST00000439805 662 ntBASIC17.53■□□□□ 0.4
RFX1P22670 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 AL135744.1-201ENST00000565098 629 ntBASIC17.53■□□□□ 0.4
RFX1P22670 AC140878.1-201ENST00000565277 250 ntBASIC17.53■□□□□ 0.4
RFX1P22670 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.53■□□□□ 0.4
RFX1P22670 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.53■□□□□ 0.4
RFX1P22670 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX1P22670 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RFX1P22670 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX1P22670 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX1P22670 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RFX1P22670 AKAP8P1-201ENST00000434743 1349 ntBASIC17.52■□□□□ 0.4
RFX1P22670 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.52■□□□□ 0.4
RFX1P22670 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RFX1P22670 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX1P22670 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.52■□□□□ 0.4
RFX1P22670 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.52■□□□□ 0.4
RFX1P22670 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.52■□□□□ 0.4
RFX1P22670 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.52■□□□□ 0.4
RFX1P22670 AC099522.2-201ENST00000607001 744 ntBASIC17.52■□□□□ 0.4
RFX1P22670 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.52■□□□□ 0.4
RFX1P22670 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.52■□□□□ 0.4
RFX1P22670 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RFX1P22670 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RFX1P22670 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RFX1P22670 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX1P22670 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RFX1P22670 AC105917.1-201ENST00000506637 2539 ntBASIC17.52■□□□□ 0.39
RFX1P22670 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX1P22670 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RFX1P22670 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX1P22670 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RFX1P22670 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms