Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 LINC02199-201ENST00000506655 2702 ntBASIC16.26■□□□□ 0.19
HLA-DPA1P20036 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 AL691432.1-201ENST00000596308 1422 ntBASIC16.26■□□□□ 0.19
HLA-DPA1P20036 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 AL365209.1-201ENST00000624418 6473 ntBASIC16.25■□□□□ 0.19
HLA-DPA1P20036 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 GPS2P2-201ENST00000430745 888 ntBASIC16.25■□□□□ 0.19
HLA-DPA1P20036 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 RBPMS2P1-201ENST00000437762 623 ntBASIC16.25■□□□□ 0.19
HLA-DPA1P20036 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 AL139010.1-201ENST00000454878 894 ntBASIC16.25■□□□□ 0.19
HLA-DPA1P20036 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 SNHG9-202ENST00000564014 471 ntBASIC16.25■□□□□ 0.19
HLA-DPA1P20036 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPA1P20036 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 AC008894.3-201ENST00000624324 3103 ntBASIC16.24■□□□□ 0.19
HLA-DPA1P20036 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 AL353705.2-201ENST00000428243 662 ntBASIC16.24■□□□□ 0.19
HLA-DPA1P20036 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 AC018529.1-201ENST00000613063 361 ntBASIC16.24■□□□□ 0.19
HLA-DPA1P20036 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.24■□□□□ 0.19
HLA-DPA1P20036 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPA1P20036 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms