Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATP2B1P20020 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AL592309.1-201ENST00000443127 649 ntBASIC18.6■□□□□ 0.57
ATP2B1P20020 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2B1P20020 AC008267.7-201ENST00000624570 1194 ntBASIC18.6■□□□□ 0.57
ATP2B1P20020 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 AL365203.3-201ENST00000609742 2057 ntBASIC18.6■□□□□ 0.57
ATP2B1P20020 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 AP002414.2-201ENST00000591780 3365 ntBASIC18.6■□□□□ 0.57
ATP2B1P20020 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2B1P20020 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATP2B1P20020 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2B1P20020 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2B1P20020 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 AC067930.6-201ENST00000623257 4947 ntBASIC18.6■□□□□ 0.57
ATP2B1P20020 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2B1P20020 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ATP2B1P20020 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP2B1P20020 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.59■□□□□ 0.57
ATP2B1P20020 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2B1P20020 ACTG1P14-201ENST00000446382 1122 ntBASIC18.59■□□□□ 0.57
ATP2B1P20020 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 RN7SL589P-201ENST00000481268 310 ntBASIC18.59■□□□□ 0.57
ATP2B1P20020 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2B1P20020 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2B1P20020 SPTSSB-204ENST00000617024 1292 ntBASIC18.59■□□□□ 0.57
ATP2B1P20020 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ATP2B1P20020 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 CDC14C-201ENST00000428251 1719 ntBASIC18.59■□□□□ 0.57
ATP2B1P20020 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 LINC02447-202ENST00000501888 2146 ntBASIC18.59■□□□□ 0.57
ATP2B1P20020 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2B1P20020 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2B1P20020 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2B1P20020 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
ATP2B1P20020 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ATP2B1P20020 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.58■□□□□ 0.57
ATP2B1P20020 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.58■□□□□ 0.57
ATP2B1P20020 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.58■□□□□ 0.57
ATP2B1P20020 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.58■□□□□ 0.57
ATP2B1P20020 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.58■□□□□ 0.57
ATP2B1P20020 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2B1P20020 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATP2B1P20020 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms