Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 AC105917.1-201ENST00000506637 2539 ntBASIC14.45□□□□□ -0.1
HLA-DOBP13765 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 FAM58DP-201ENST00000428076 619 ntBASIC14.45□□□□□ -0.1
HLA-DOBP13765 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 AC093520.2-201ENST00000561830 333 ntBASIC14.45□□□□□ -0.1
HLA-DOBP13765 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 AP3S2-216ENST00000617003 1561 ntBASIC14.44□□□□□ -0.1
HLA-DOBP13765 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 AC005237.2-201ENST00000434368 219 ntBASIC14.44□□□□□ -0.1
HLA-DOBP13765 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 AC024267.1-201ENST00000582320 895 ntBASIC14.44□□□□□ -0.1
HLA-DOBP13765 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 AC084121.4-201ENST00000641598 221 ntBASIC14.44□□□□□ -0.1
HLA-DOBP13765 AF228730.8-201ENST00000642140 221 ntBASIC14.44□□□□□ -0.1
HLA-DOBP13765 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DOBP13765 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DOBP13765 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DOBP13765 FAM220BP-201ENST00000377689 816 ntBASIC14.43□□□□□ -0.1
HLA-DOBP13765 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DOBP13765 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms