Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CFTRP13569 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC26.86■■□□□ 1.89
CFTRP13569 AC018892.3-201ENST00000623986 2499 ntBASIC26.86■■□□□ 1.89
CFTRP13569 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CFTRP13569 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
CFTRP13569 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC26.86■■□□□ 1.89
CFTRP13569 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC26.86■■□□□ 1.89
CFTRP13569 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC26.86■■□□□ 1.89
CFTRP13569 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CFTRP13569 LRRFIP1P1-201ENST00000498774 2246 ntBASIC26.86■■□□□ 1.89
CFTRP13569 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC26.85■■□□□ 1.89
CFTRP13569 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC26.85■■□□□ 1.89
CFTRP13569 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC26.85■■□□□ 1.89
CFTRP13569 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CFTRP13569 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC26.85■■□□□ 1.89
CFTRP13569 POM121L8P-201ENST00000417732 1281 ntBASIC26.85■■□□□ 1.89
CFTRP13569 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 POM121L9P-203ENST00000441984 1285 ntBASIC26.85■■□□□ 1.89
CFTRP13569 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 NUP210P1-202ENST00000504322 710 ntBASIC26.85■■□□□ 1.89
CFTRP13569 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
CFTRP13569 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC26.85■■□□□ 1.89
CFTRP13569 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC26.85■■□□□ 1.89
CFTRP13569 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC26.85■■□□□ 1.89
CFTRP13569 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC26.85■■□□□ 1.89
CFTRP13569 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC26.85■■□□□ 1.89
CFTRP13569 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC26.85■■□□□ 1.89
CFTRP13569 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFTRP13569 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC26.84■■□□□ 1.89
CFTRP13569 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC26.84■■□□□ 1.89
CFTRP13569 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
CFTRP13569 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CFTRP13569 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC26.84■■□□□ 1.89
CFTRP13569 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC26.84■■□□□ 1.89
CFTRP13569 RN7SL11P-201ENST00000471305 293 ntBASIC26.84■■□□□ 1.89
CFTRP13569 AC008267.1-201ENST00000474858 1069 ntBASIC26.84■■□□□ 1.89
CFTRP13569 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC26.84■■□□□ 1.89
CFTRP13569 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC26.84■■□□□ 1.89
CFTRP13569 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC26.84■■□□□ 1.89
CFTRP13569 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC26.84■■□□□ 1.89
CFTRP13569 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC26.84■■□□□ 1.89
CFTRP13569 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFTRP13569 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC26.83■■□□□ 1.89
CFTRP13569 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
CFTRP13569 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC26.83■■□□□ 1.89
CFTRP13569 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 UFM1-202ENST00000379649 846 ntTSL 4 BASIC26.83■■□□□ 1.89
CFTRP13569 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 HIST2H2BB-201ENST00000449108 381 ntBASIC26.83■■□□□ 1.89
CFTRP13569 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CFTRP13569 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFTRP13569 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CFTRP13569 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
CFTRP13569 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFTRP13569 NDUFAB1P1-201ENST00000404262 460 ntBASIC26.82■■□□□ 1.88
CFTRP13569 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CFTRP13569 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC26.82■■□□□ 1.88
CFTRP13569 AL008707.1-201ENST00000422498 534 ntBASIC26.82■■□□□ 1.88
CFTRP13569 EHF-205ENST00000527935 557 ntTSL 2 BASIC26.82■■□□□ 1.88
CFTRP13569 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC26.82■■□□□ 1.88
CFTRP13569 RN7SL555P-201ENST00000584742 339 ntBASIC26.82■■□□□ 1.88
CFTRP13569 TBCB-211ENST00000589996 724 ntTSL 3 BASIC26.82■■□□□ 1.88
CFTRP13569 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC26.82■■□□□ 1.88
CFTRP13569 ZACNP1-201ENST00000612259 710 ntBASIC26.82■■□□□ 1.88
CFTRP13569 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CFTRP13569 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CFTRP13569 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFTRP13569 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFTRP13569 UBALD1-205ENST00000590891 2641 ntBASIC26.82■■□□□ 1.88
CFTRP13569 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CFTRP13569 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFTRP13569 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFTRP13569 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC26.82■■□□□ 1.88
CFTRP13569 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms