Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.89■□□□□ 0.61
TOP1P11387 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TOP1P11387 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 UGT1A2P-201ENST00000454886 866 ntBASIC18.89■□□□□ 0.61
TOP1P11387 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.89■□□□□ 0.61
TOP1P11387 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.89■□□□□ 0.61
TOP1P11387 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.89■□□□□ 0.61
TOP1P11387 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.89■□□□□ 0.61
TOP1P11387 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.89■□□□□ 0.61
TOP1P11387 MIR3197-201ENST00000582241 73 ntBASIC18.89■□□□□ 0.61
TOP1P11387 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TOP1P11387 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.89■□□□□ 0.61
TOP1P11387 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.89■□□□□ 0.61
TOP1P11387 AC087499.5-201ENST00000452760 1342 ntBASIC18.89■□□□□ 0.61
TOP1P11387 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.89■□□□□ 0.61
TOP1P11387 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.89■□□□□ 0.61
TOP1P11387 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.89■□□□□ 0.61
TOP1P11387 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.89■□□□□ 0.61
TOP1P11387 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TOP1P11387 AL136982.4-201ENST00000437689 1740 ntBASIC18.88■□□□□ 0.61
TOP1P11387 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.88■□□□□ 0.61
TOP1P11387 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.88■□□□□ 0.61
TOP1P11387 AL844908.2-201ENST00000609461 460 ntBASIC18.88■□□□□ 0.61
TOP1P11387 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
TOP1P11387 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TOP1P11387 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.88■□□□□ 0.61
TOP1P11387 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.88■□□□□ 0.61
TOP1P11387 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.88■□□□□ 0.61
TOP1P11387 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TOP1P11387 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 AC092364.2-201ENST00000596710 2692 ntBASIC18.87■□□□□ 0.61
TOP1P11387 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.87■□□□□ 0.61
TOP1P11387 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.87■□□□□ 0.61
TOP1P11387 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.87■□□□□ 0.61
TOP1P11387 MIR4745-201ENST00000577608 62 ntBASIC18.87■□□□□ 0.61
TOP1P11387 CYP4F24P-201ENST00000586049 1580 ntBASIC18.87■□□□□ 0.61
TOP1P11387 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.87■□□□□ 0.61
TOP1P11387 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.87■□□□□ 0.61
TOP1P11387 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms