Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AC068418.2-201ENST00000577309 3703 ntBASIC17.16■□□□□ 0.34
FAM228BP0C875 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.16■□□□□ 0.34
FAM228BP0C875 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM228BP0C875 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM228BP0C875 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM228BP0C875 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.16■□□□□ 0.34
FAM228BP0C875 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.16■□□□□ 0.34
FAM228BP0C875 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
FAM228BP0C875 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM228BP0C875 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.16■□□□□ 0.34
FAM228BP0C875 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM228BP0C875 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.15■□□□□ 0.34
FAM228BP0C875 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 AL691432.1-201ENST00000596308 1422 ntBASIC17.15■□□□□ 0.34
FAM228BP0C875 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 AC098859.1-201ENST00000502915 1238 ntBASIC17.15■□□□□ 0.34
FAM228BP0C875 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.15■□□□□ 0.34
FAM228BP0C875 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.15■□□□□ 0.34
FAM228BP0C875 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FAM228BP0C875 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM228BP0C875 BNIP3P1-202ENST00000550043 1585 ntBASIC17.15■□□□□ 0.34
FAM228BP0C875 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM228BP0C875 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.14■□□□□ 0.34
FAM228BP0C875 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
FAM228BP0C875 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.14■□□□□ 0.34
FAM228BP0C875 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
FAM228BP0C875 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM228BP0C875 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM228BP0C875 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FAM228BP0C875 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.14■□□□□ 0.33
FAM228BP0C875 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 AC112191.1-201ENST00000523689 701 ntBASIC17.14■□□□□ 0.33
FAM228BP0C875 RARRES2P8-201ENST00000566335 367 ntBASIC17.14■□□□□ 0.33
FAM228BP0C875 SPTSSB-204ENST00000617024 1292 ntBASIC17.14■□□□□ 0.33
FAM228BP0C875 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FAM228BP0C875 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM228BP0C875 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM228BP0C875 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM228BP0C875 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM228BP0C875 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM228BP0C875 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FAM228BP0C875 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM228BP0C875 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.13■□□□□ 0.33
FAM228BP0C875 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM228BP0C875 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM228BP0C875 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM228BP0C875 SLC25A1P1-201ENST00000528351 927 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms