Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 AL391005.1-201ENST00000623953 2435 ntBASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 PCDHA1-201ENST00000378133 2726 ntBASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40ALP0C0E4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC138969.3-201ENST00000546612 1459 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC138932.2-201ENST00000548268 1459 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC126755.4-201ENST00000549796 1459 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC006449.5-201ENST00000610658 2098 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC055876.2-201ENST00000531834 546 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC004461.2-201ENST00000629517 803 ntBASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB40ALP0C0E4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms