Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.66□□□□□ -0.22
HLA-AP01891 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 ATP5G2P1-201ENST00000433580 426 ntBASIC13.66□□□□□ -0.22
HLA-AP01891 HCG4P8-203ENST00000443049 980 ntBASIC13.66□□□□□ -0.22
HLA-AP01891 KRT17P6-201ENST00000453795 1220 ntBASIC13.66□□□□□ -0.22
HLA-AP01891 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.66□□□□□ -0.22
HLA-AP01891 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.66□□□□□ -0.22
HLA-AP01891 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.66□□□□□ -0.22
HLA-AP01891 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.66□□□□□ -0.22
HLA-AP01891 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.66□□□□□ -0.22
HLA-AP01891 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-AP01891 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-AP01891 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-AP01891 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HLA-AP01891 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 AL592424.1-201ENST00000563624 1536 ntBASIC13.65□□□□□ -0.22
HLA-AP01891 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HLA-AP01891 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 SPDYE21P-201ENST00000413323 827 ntBASIC13.65□□□□□ -0.22
HLA-AP01891 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 AC104819.1-201ENST00000504587 486 ntBASIC13.65□□□□□ -0.22
HLA-AP01891 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-AP01891 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-AP01891 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
HLA-AP01891 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
HLA-AP01891 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-AP01891 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 LINC00528-201ENST00000600723 2160 ntBASIC13.65□□□□□ -0.22
HLA-AP01891 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-AP01891 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-AP01891 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
HLA-AP01891 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms