Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.1■□□□□ 0.17
TRBC1P01850 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBC1P01850 TEX28P1-201ENST00000613479 1221 ntBASIC16.1■□□□□ 0.17
TRBC1P01850 TEX28P2-201ENST00000617764 1221 ntBASIC16.1■□□□□ 0.17
TRBC1P01850 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRBC1P01850 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBC1P01850 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBC1P01850 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBC1P01850 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBC1P01850 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRBC1P01850 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRBC1P01850 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBC1P01850 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRBC1P01850 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBC1P01850 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBC1P01850 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRBC1P01850 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBC1P01850 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBC1P01850 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.09■□□□□ 0.17
TRBC1P01850 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBC1P01850 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBC1P01850 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBC1P01850 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBC1P01850 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBC1P01850 IGHV3-42-201ENST00000520410 361 ntBASIC16.09■□□□□ 0.17
TRBC1P01850 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBC1P01850 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBC1P01850 AC005498.2-205ENST00000593218 784 ntBASIC16.09■□□□□ 0.17
TRBC1P01850 AC112504.1-201ENST00000623415 1841 ntBASIC16.09■□□□□ 0.17
TRBC1P01850 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBC1P01850 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBC1P01850 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBC1P01850 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBC1P01850 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBC1P01850 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBC1P01850 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.08■□□□□ 0.17
TRBC1P01850 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRBC1P01850 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
TRBC1P01850 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TRBC1P01850 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
TRBC1P01850 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.08■□□□□ 0.17
TRBC1P01850 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.08■□□□□ 0.17
TRBC1P01850 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBC1P01850 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBC1P01850 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBC1P01850 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBC1P01850 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.08■□□□□ 0.16
TRBC1P01850 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBC1P01850 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBC1P01850 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBC1P01850 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBC1P01850 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBC1P01850 AC100757.3-201ENST00000622361 1406 ntBASIC16.08■□□□□ 0.16
TRBC1P01850 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.08■□□□□ 0.16
TRBC1P01850 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBC1P01850 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBC1P01850 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBC1P01850 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBC1P01850 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRBC1P01850 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBC1P01850 PCDHA1-201ENST00000378133 2726 ntBASIC16.08■□□□□ 0.16
TRBC1P01850 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBC1P01850 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBC1P01850 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms