Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 AC114501.2-201ENST00000439631 535 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 RN7SL752P-201ENST00000463779 287 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 MIR4259-201ENST00000584466 101 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCA1O95477 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ABCA1O95477 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ABCA1O95477 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.52□□□□□ -0.24
ABCA1O95477 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 KRT8P49-201ENST00000604166 1432 ntBASIC13.52□□□□□ -0.24
ABCA1O95477 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA1O95477 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.52□□□□□ -0.24
ABCA1O95477 FAM8A2P-201ENST00000528813 1142 ntBASIC13.52□□□□□ -0.24
ABCA1O95477 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA1O95477 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ABCA1O95477 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA1O95477 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA1O95477 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA1O95477 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA1O95477 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
ABCA1O95477 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.52□□□□□ -0.25
ABCA1O95477 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.52□□□□□ -0.25
ABCA1O95477 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 FAM86MP-201ENST00000340703 885 ntBASIC13.52□□□□□ -0.25
ABCA1O95477 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCA1O95477 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
ABCA1O95477 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA1O95477 AC124067.4-201ENST00000519691 2379 ntBASIC13.52□□□□□ -0.25
ABCA1O95477 AC060834.1-201ENST00000443027 2032 ntBASIC13.51□□□□□ -0.25
ABCA1O95477 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ABCA1O95477 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ABCA1O95477 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCA1O95477 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 RN7SL828P-201ENST00000607615 303 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms