Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.5□□□□□ -0.09
UBL3O95164 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UBL3O95164 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.5□□□□□ -0.09
UBL3O95164 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBL3O95164 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
UBL3O95164 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBL3O95164 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBL3O95164 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
UBL3O95164 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UBL3O95164 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
UBL3O95164 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.5□□□□□ -0.09
UBL3O95164 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.5□□□□□ -0.09
UBL3O95164 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBL3O95164 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
UBL3O95164 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UBL3O95164 WASH6P-202ENST00000359512 1437 ntBASIC14.49□□□□□ -0.09
UBL3O95164 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.49□□□□□ -0.09
UBL3O95164 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
UBL3O95164 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.49□□□□□ -0.09
UBL3O95164 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 FAM86C2P-203ENST00000528684 1004 ntBASIC14.49□□□□□ -0.09
UBL3O95164 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
UBL3O95164 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.49□□□□□ -0.09
UBL3O95164 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.49□□□□□ -0.09
UBL3O95164 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 AC023157.3-201ENST00000619086 2088 ntBASIC14.49□□□□□ -0.09
UBL3O95164 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 AC067930.6-201ENST00000623257 4947 ntBASIC14.49□□□□□ -0.09
UBL3O95164 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.49□□□□□ -0.09
UBL3O95164 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBL3O95164 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBL3O95164 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
UBL3O95164 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UBL3O95164 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UBL3O95164 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 AC092865.5-201ENST00000545435 363 ntBASIC14.48□□□□□ -0.09
UBL3O95164 RARRES2P8-201ENST00000566335 367 ntBASIC14.48□□□□□ -0.09
UBL3O95164 AC005829.1-201ENST00000570002 483 ntBASIC14.48□□□□□ -0.09
UBL3O95164 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 AL078644.1-201ENST00000609881 752 ntBASIC14.48□□□□□ -0.09
UBL3O95164 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.48□□□□□ -0.09
UBL3O95164 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UBL3O95164 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.48□□□□□ -0.09
UBL3O95164 PPT1-215ENST00000641471 2368 ntBASIC14.48□□□□□ -0.09
UBL3O95164 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBL3O95164 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms