Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.9■□□□□ 0.78
CACNA1FO60840 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.9■□□□□ 0.78
CACNA1FO60840 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 KRT8P22-201ENST00000562317 1415 ntBASIC19.9■□□□□ 0.78
CACNA1FO60840 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 SOCS2P1-201ENST00000417727 557 ntBASIC19.9■□□□□ 0.78
CACNA1FO60840 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.9■□□□□ 0.78
CACNA1FO60840 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.9■□□□□ 0.78
CACNA1FO60840 MIR8072-201ENST00000614241 80 ntBASIC19.9■□□□□ 0.78
CACNA1FO60840 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CACNA1FO60840 RPSAP52-203ENST00000622976 1023 ntBASIC19.9■□□□□ 0.78
CACNA1FO60840 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1FO60840 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CACNA1FO60840 AC090616.6-203ENST00000579186 1945 ntBASIC19.9■□□□□ 0.78
CACNA1FO60840 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CACNA1FO60840 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.89■□□□□ 0.78
CACNA1FO60840 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CACNA1FO60840 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CACNA1FO60840 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1FO60840 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CACNA1FO60840 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CACNA1FO60840 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
CACNA1FO60840 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.89■□□□□ 0.77
CACNA1FO60840 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CACNA1FO60840 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1FO60840 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.88■□□□□ 0.77
CACNA1FO60840 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.88■□□□□ 0.77
CACNA1FO60840 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CACNA1FO60840 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CACNA1FO60840 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CACNA1FO60840 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.88■□□□□ 0.77
CACNA1FO60840 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CACNA1FO60840 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.88■□□□□ 0.77
CACNA1FO60840 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.88■□□□□ 0.77
CACNA1FO60840 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 MYCLP2-201ENST00000449268 967 ntBASIC19.88■□□□□ 0.77
CACNA1FO60840 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.88■□□□□ 0.77
CACNA1FO60840 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.88■□□□□ 0.77
CACNA1FO60840 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.88■□□□□ 0.77
CACNA1FO60840 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1FO60840 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1FO60840 AC007950.2-201ENST00000615045 2347 ntBASIC19.87■□□□□ 0.77
CACNA1FO60840 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CACNA1FO60840 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1FO60840 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 AC127383.1-201ENST00000444697 1800 ntBASIC19.87■□□□□ 0.77
CACNA1FO60840 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CACNA1FO60840 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.87■□□□□ 0.77
CACNA1FO60840 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CACNA1FO60840 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.87■□□□□ 0.77
CACNA1FO60840 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1FO60840 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1FO60840 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms