Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.68■□□□□ 0.58
CTNND1O60716 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNND1O60716 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNND1O60716 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNND1O60716 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNND1O60716 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNND1O60716 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CTNND1O60716 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNND1O60716 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.68■□□□□ 0.58
CTNND1O60716 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
CTNND1O60716 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.68■□□□□ 0.58
CTNND1O60716 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNND1O60716 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 REXO1L8P-201ENST00000604378 1897 ntBASIC18.67■□□□□ 0.58
CTNND1O60716 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTNND1O60716 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTNND1O60716 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNND1O60716 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNND1O60716 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNND1O60716 ENPP7P5-201ENST00000541031 1031 ntBASIC18.67■□□□□ 0.58
CTNND1O60716 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 AL359711.2-201ENST00000563105 872 ntBASIC18.67■□□□□ 0.58
CTNND1O60716 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNND1O60716 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CTNND1O60716 MIR5189-201ENST00000577370 114 ntBASIC18.67■□□□□ 0.58
CTNND1O60716 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNND1O60716 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNND1O60716 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNND1O60716 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTNND1O60716 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CTNND1O60716 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.66■□□□□ 0.58
CTNND1O60716 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNND1O60716 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.66■□□□□ 0.58
CTNND1O60716 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.66■□□□□ 0.58
CTNND1O60716 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.66■□□□□ 0.58
CTNND1O60716 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNND1O60716 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.66■□□□□ 0.58
CTNND1O60716 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNND1O60716 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CTNND1O60716 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CTNND1O60716 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTNND1O60716 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CTNND1O60716 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms