Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 AL353779.1-201ENST00000434793 351 ntBASIC18.08■□□□□ 0.48
SORBS3O60504 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.08■□□□□ 0.48
SORBS3O60504 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.08■□□□□ 0.48
SORBS3O60504 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SORBS3O60504 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.08■□□□□ 0.48
SORBS3O60504 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.08■□□□□ 0.48
SORBS3O60504 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.08■□□□□ 0.48
SORBS3O60504 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.08■□□□□ 0.48
SORBS3O60504 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SORBS3O60504 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SORBS3O60504 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SORBS3O60504 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SORBS3O60504 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
SORBS3O60504 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.07■□□□□ 0.48
SORBS3O60504 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 AZGP1P1-201ENST00000411909 902 ntBASIC18.07■□□□□ 0.48
SORBS3O60504 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 ZNF890P-202ENST00000530367 1156 ntBASIC18.07■□□□□ 0.48
SORBS3O60504 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.07■□□□□ 0.48
SORBS3O60504 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
SORBS3O60504 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.07■□□□□ 0.48
SORBS3O60504 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SORBS3O60504 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SORBS3O60504 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SORBS3O60504 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 ME2P1-201ENST00000426028 1970 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
SORBS3O60504 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
SORBS3O60504 DFFBP1-201ENST00000433250 979 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.06■□□□□ 0.48
SORBS3O60504 KRT17P7-201ENST00000451704 1104 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 INE1-201ENST00000456273 945 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 MEIS3P1-201ENST00000495167 958 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.06■□□□□ 0.48
SORBS3O60504 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms