Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC3O60481 AL513523.2-202ENST00000427283 2040 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 AC018892.3-201ENST00000623986 2499 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ZIC3O60481 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ZIC3O60481 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 AC236430.1-201ENST00000402231 743 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 AC114501.2-201ENST00000439631 535 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 FAM207CP-201ENST00000443486 507 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.42□□□□□ -0.1
ZIC3O60481 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ZIC3O60481 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.42□□□□□ -0.1
ZIC3O60481 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.42□□□□□ -0.1
ZIC3O60481 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.42□□□□□ -0.1
ZIC3O60481 AC135586.1-201ENST00000539323 574 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.42□□□□□ -0.1
ZIC3O60481 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 LINC02560-201ENST00000596379 459 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 AL450472.2-201ENST00000603663 1156 ntBASIC14.42□□□□□ -0.1
ZIC3O60481 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.42□□□□□ -0.1
ZIC3O60481 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ZIC3O60481 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC3O60481 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC3O60481 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 Z97205.2-201ENST00000564697 1639 ntBASIC14.41□□□□□ -0.1
ZIC3O60481 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC3O60481 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZIC3O60481 AC026691.1-201ENST00000602502 2017 ntBASIC14.41□□□□□ -0.1
ZIC3O60481 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.41□□□□□ -0.1
ZIC3O60481 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ZIC3O60481 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZIC3O60481 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC3O60481 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 SERBP1P5-201ENST00000510079 1181 ntBASIC14.41□□□□□ -0.1
ZIC3O60481 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 AC008761.3-201ENST00000624803 892 ntBASIC14.41□□□□□ -0.1
ZIC3O60481 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 AC004461.2-201ENST00000629517 803 ntBASIC14.41□□□□□ -0.1
ZIC3O60481 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC3O60481 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ZIC3O60481 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC3O60481 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ZIC3O60481 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZIC3O60481 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ZIC3O60481 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ZIC3O60481 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 DOC2GP-204ENST00000639052 2548 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms