Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 TPSP2-201ENST00000561760 610 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
SSSCA1O60232 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 AL022326.1-202ENST00000641533 845 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.19□□□□□ -0.3
SSSCA1O60232 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.19□□□□□ -0.3
SSSCA1O60232 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSSCA1O60232 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 AC007686.3-201ENST00000619017 3487 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSSCA1O60232 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.18□□□□□ -0.3
SSSCA1O60232 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 AC007292.2-201ENST00000593524 1812 ntBASIC13.18□□□□□ -0.3
SSSCA1O60232 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SSSCA1O60232 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 AC067750.1-201ENST00000608826 6545 ntBASIC13.18□□□□□ -0.3
SSSCA1O60232 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.18□□□□□ -0.3
SSSCA1O60232 PRYP5-201ENST00000451909 266 ntBASIC13.18□□□□□ -0.3
SSSCA1O60232 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 AF228730.7-201ENST00000641842 219 ntBASIC13.18□□□□□ -0.3
SSSCA1O60232 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SSSCA1O60232 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.18□□□□□ -0.3
SSSCA1O60232 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSSCA1O60232 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSSCA1O60232 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.17□□□□□ -0.3
SSSCA1O60232 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSSCA1O60232 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSSCA1O60232 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms