Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.4■□□□□ 0.38
EXTL3O43909 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.4■□□□□ 0.38
EXTL3O43909 AC018695.7-201ENST00000624587 2492 ntBASIC17.4■□□□□ 0.38
EXTL3O43909 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EXTL3O43909 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.4■□□□□ 0.38
EXTL3O43909 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.4■□□□□ 0.38
EXTL3O43909 SERBP1P3-201ENST00000459980 809 ntBASIC17.4■□□□□ 0.38
EXTL3O43909 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EXTL3O43909 IGHV3-42-201ENST00000520410 361 ntBASIC17.4■□□□□ 0.38
EXTL3O43909 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.4■□□□□ 0.38
EXTL3O43909 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
EXTL3O43909 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.4■□□□□ 0.38
EXTL3O43909 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.4■□□□□ 0.38
EXTL3O43909 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.4■□□□□ 0.38
EXTL3O43909 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.4■□□□□ 0.38
EXTL3O43909 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EXTL3O43909 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EXTL3O43909 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.4■□□□□ 0.38
EXTL3O43909 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EXTL3O43909 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EXTL3O43909 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
EXTL3O43909 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EXTL3O43909 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.39■□□□□ 0.38
EXTL3O43909 AC100757.3-201ENST00000622361 1406 ntBASIC17.39■□□□□ 0.38
EXTL3O43909 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.39■□□□□ 0.37
EXTL3O43909 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.39■□□□□ 0.37
EXTL3O43909 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 AZGP1P1-201ENST00000411909 902 ntBASIC17.39■□□□□ 0.37
EXTL3O43909 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.39■□□□□ 0.37
EXTL3O43909 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.39■□□□□ 0.37
EXTL3O43909 PHKG1P2-201ENST00000457537 863 ntBASIC17.39■□□□□ 0.37
EXTL3O43909 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.39■□□□□ 0.37
EXTL3O43909 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 AL450472.2-201ENST00000603663 1156 ntBASIC17.39■□□□□ 0.37
EXTL3O43909 AL590560.3-201ENST00000623350 461 ntBASIC17.39■□□□□ 0.37
EXTL3O43909 AL033527.5-202ENST00000641632 1098 ntBASIC17.39■□□□□ 0.37
EXTL3O43909 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.39■□□□□ 0.37
EXTL3O43909 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EXTL3O43909 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EXTL3O43909 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
EXTL3O43909 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EXTL3O43909 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EXTL3O43909 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.38■□□□□ 0.37
EXTL3O43909 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
EXTL3O43909 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EXTL3O43909 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EXTL3O43909 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.38■□□□□ 0.37
EXTL3O43909 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.38■□□□□ 0.37
EXTL3O43909 AC241585.1-201ENST00000433527 519 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms