Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 KRT18P3-201ENST00000451602 1288 ntBASIC14.71□□□□□ -0.05
RNF13O43567 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF13O43567 PDPK2P-202ENST00000562415 1191 ntBASIC14.71□□□□□ -0.05
RNF13O43567 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF13O43567 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
RNF13O43567 AC140113.2-201ENST00000604370 208 ntBASIC14.71□□□□□ -0.05
RNF13O43567 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF13O43567 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF13O43567 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF13O43567 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF13O43567 AC006058.4-201ENST00000624016 1670 ntBASIC14.71□□□□□ -0.06
RNF13O43567 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF13O43567 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RNF13O43567 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF13O43567 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 PRAL-201ENST00000624952 3286 ntBASIC14.7□□□□□ -0.06
RNF13O43567 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RNF13O43567 AC002056.1-201ENST00000395613 760 ntBASIC14.7□□□□□ -0.06
RNF13O43567 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RNF13O43567 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
RNF13O43567 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.7□□□□□ -0.06
RNF13O43567 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 FAM197Y3-203ENST00000618346 717 ntBASIC14.7□□□□□ -0.06
RNF13O43567 AL513190.1-201ENST00000621254 727 ntBASIC14.7□□□□□ -0.06
RNF13O43567 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.7□□□□□ -0.06
RNF13O43567 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF13O43567 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNF13O43567 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF13O43567 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF13O43567 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 AC007326.2-201ENST00000624224 7579 ntBASIC14.69□□□□□ -0.06
RNF13O43567 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 WASH6P-202ENST00000359512 1437 ntBASIC14.69□□□□□ -0.06
RNF13O43567 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms