Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
AP3B1O00203 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 NORAD-201ENST00000565493 5339 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
AP3B1O00203 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP3B1O00203 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 AL691432.1-201ENST00000596308 1422 ntBASIC16.28■□□□□ 0.2
AP3B1O00203 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 AC026396.1-201ENST00000419388 421 ntBASIC16.28■□□□□ 0.2
AP3B1O00203 MKNK2P1-201ENST00000437526 628 ntBASIC16.28■□□□□ 0.2
AP3B1O00203 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.28■□□□□ 0.2
AP3B1O00203 KRT18P58-201ENST00000527480 1120 ntBASIC16.28■□□□□ 0.2
AP3B1O00203 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 AC026979.3-201ENST00000607315 403 ntBASIC16.28■□□□□ 0.2
AP3B1O00203 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.28■□□□□ 0.2
AP3B1O00203 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3B1O00203 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3B1O00203 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3B1O00203 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3B1O00203 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
AP3B1O00203 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 MIR346-201ENST00000362234 95 ntBASIC16.27■□□□□ 0.2
AP3B1O00203 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 HLA-H-201ENST00000383620 1096 ntBASIC16.27■□□□□ 0.2
AP3B1O00203 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3B1O00203 AC142381.1-201ENST00000426099 345 ntBASIC16.27■□□□□ 0.2
AP3B1O00203 IGHV3-62-201ENST00000520057 340 ntBASIC16.27■□□□□ 0.2
AP3B1O00203 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3B1O00203 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 AC092902.6-201ENST00000641783 218 ntBASIC16.27■□□□□ 0.2
AP3B1O00203 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.27■□□□□ 0.2
AP3B1O00203 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
AP3B1O00203 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3B1O00203 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3B1O00203 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
AP3B1O00203 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
AP3B1O00203 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
AP3B1O00203 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3B1O00203 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.26■□□□□ 0.19
AP3B1O00203 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms