Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC188H7C350 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC188H7C350 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.75■□□□□ 0.27
CCDC188H7C350 AC134407.2-201ENST00000625089 1978 ntBASIC16.75■□□□□ 0.27
CCDC188H7C350 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC188H7C350 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 AC073648.2-201ENST00000510116 352 ntBASIC16.75■□□□□ 0.27
CCDC188H7C350 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC188H7C350 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC188H7C350 AC109635.5-201ENST00000533593 962 ntBASIC16.75■□□□□ 0.27
CCDC188H7C350 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 AC105339.3-201ENST00000560043 636 ntBASIC16.75■□□□□ 0.27
CCDC188H7C350 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC188H7C350 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC188H7C350 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC188H7C350 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC188H7C350 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 AL589702.1-201ENST00000641229 1509 ntBASIC16.75■□□□□ 0.27
CCDC188H7C350 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC188H7C350 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC188H7C350 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC188H7C350 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 AC026396.1-201ENST00000419388 421 ntBASIC16.74■□□□□ 0.27
CCDC188H7C350 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC188H7C350 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC188H7C350 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC188H7C350 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC188H7C350 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC188H7C350 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms