Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L11C9JVI0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L11C9JVI0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.57■□□□□ 0.56
USP17L11C9JVI0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 EEF1DP4-201ENST00000446006 880 ntBASIC18.56■□□□□ 0.56
USP17L11C9JVI0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 AC245100.5-201ENST00000452108 331 ntBASIC18.56■□□□□ 0.56
USP17L11C9JVI0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 AC243562.2-201ENST00000561247 970 ntBASIC18.56■□□□□ 0.56
USP17L11C9JVI0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 LINC01115-203ENST00000606068 577 ntBASIC18.56■□□□□ 0.56
USP17L11C9JVI0 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.56■□□□□ 0.56
USP17L11C9JVI0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP17L11C9JVI0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 RN7SL399P-201ENST00000471648 279 ntBASIC18.55■□□□□ 0.56
USP17L11C9JVI0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 AC099398.1-201ENST00000567919 2776 ntBASIC18.55■□□□□ 0.56
USP17L11C9JVI0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 KRT8P37-201ENST00000451609 1420 ntBASIC18.55■□□□□ 0.56
USP17L11C9JVI0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L11C9JVI0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 AZGP1P1-201ENST00000411909 902 ntBASIC18.54■□□□□ 0.56
USP17L11C9JVI0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms