Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 AC140658.5-201ENST00000438532 169 ntBASIC17.11■□□□□ 0.33
RCCD1A6NED2 RNA5SP419-201ENST00000515908 135 ntBASIC17.11■□□□□ 0.33
RCCD1A6NED2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCCD1A6NED2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RCCD1A6NED2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 CRYGEP-201ENST00000412192 528 ntBASIC17.1■□□□□ 0.33
RCCD1A6NED2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 LINC00528-201ENST00000600723 2160 ntBASIC17.1■□□□□ 0.33
RCCD1A6NED2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RCCD1A6NED2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.1■□□□□ 0.33
RCCD1A6NED2 AGAP7P-201ENST00000582299 2062 ntBASIC17.09■□□□□ 0.33
RCCD1A6NED2 AGAP14-201ENST00000624701 2060 ntBASIC17.09■□□□□ 0.33
RCCD1A6NED2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms