Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 KRT16P4-201ENST00000453883 522 ntBASIC14.04□□□□□ -0.16
SHISA3A0PJX4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 AL732292.2-201ENST00000609649 430 ntBASIC14.04□□□□□ -0.16
SHISA3A0PJX4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHISA3A0PJX4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 RPS15P9-201ENST00000494093 319 ntBASIC14.03□□□□□ -0.16
SHISA3A0PJX4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 AC091076.1-201ENST00000610741 619 ntBASIC14.03□□□□□ -0.16
SHISA3A0PJX4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.03□□□□□ -0.16
SHISA3A0PJX4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms