Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.71■□□□□ 0.58
CCDC196A0A1B0GTZ2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AL139400.1-201ENST00000366220 510 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 CNN2P2-201ENST00000443536 909 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 CNN2P3-201ENST00000450201 906 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC109322.1-201ENST00000524499 1264 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC004449.1-201ENST00000564240 433 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 RN7SL828P-201ENST00000607615 303 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 GPALPP1-207ENST00000611650 899 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AL136317.3-201ENST00000618497 906 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 LINC02199-201ENST00000506655 2702 ntBASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC196A0A1B0GTZ2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 EEF1DP4-201ENST00000446006 880 ntBASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 BANF1P1-201ENST00000553684 263 ntBASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC015911.4-201ENST00000588022 1070 ntBASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms