Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 PGGT1BP2-201ENST00000398621 1028 ntBASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 AL354989.2-201ENST00000435838 1540 ntBASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC23.75■■□□□ 1.39
CDC42BPBQ9Y5S2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 KLF2P2-201ENST00000416807 1039 ntBASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ADM-202ENST00000524948 584 ntTSL 2 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 AC073413.1-201ENST00000603927 732 ntBASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 AL023775.1-201ENST00000454907 1746 ntBASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC23.74■■□□□ 1.39
CDC42BPBQ9Y5S2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 AKR7A2P1-201ENST00000460134 915 ntBASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 AC097724.1-201ENST00000609581 426 ntBASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 KRTAP10-13P-201ENST00000412914 571 ntBASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms