Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 PI4KAP1-204ENST00000612579 1703 ntBASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 AC098831.1-202ENST00000438821 336 ntBASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 BX640515.1-201ENST00000617215 977 ntBASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 GGTLC5P-201ENST00000617623 998 ntBASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HCC1Q9Y3T6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 IL9RP2-201ENST00000423948 1312 ntBASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 KRT18P27-201ENST00000427733 1299 ntBASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 RPS15P9-201ENST00000494093 319 ntBASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 RNA5SP419-201ENST00000515908 135 ntBASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 ZNF259P1-201ENST00000407656 1365 ntBASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 AC243591.1-201ENST00000452967 1364 ntBASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms