Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q9Y3F1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q9Y3F1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.58■□□□□ 0.4
Q9Y3F1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 MIR648-201ENST00000385046 94 ntBASIC17.58■□□□□ 0.4
Q9Y3F1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 CNN2P8-201ENST00000421872 913 ntBASIC17.58■□□□□ 0.4
Q9Y3F1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.58■□□□□ 0.4
Q9Y3F1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.58■□□□□ 0.4
Q9Y3F1 PFN1P12-201ENST00000455938 534 ntBASIC17.58■□□□□ 0.4
Q9Y3F1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 AC106760.1-201ENST00000508690 800 ntBASIC17.58■□□□□ 0.4
Q9Y3F1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.58■□□□□ 0.4
Q9Y3F1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Q9Y3F1 KRT90P-201ENST00000549264 1064 ntBASIC17.58■□□□□ 0.4
Q9Y3F1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Q9Y3F1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.58■□□□□ 0.4
Q9Y3F1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Q9Y3F1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Q9Y3F1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.58■□□□□ 0.4
Q9Y3F1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.58■□□□□ 0.4
Q9Y3F1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.58■□□□□ 0.4
Q9Y3F1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9Y3F1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Q9Y3F1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.57■□□□□ 0.4
Q9Y3F1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q9Y3F1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Q9Y3F1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.57■□□□□ 0.4
Q9Y3F1 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.57■□□□□ 0.4
Q9Y3F1 GNRHR2-203ENST00000581100 1187 ntBASIC17.57■□□□□ 0.4
Q9Y3F1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Q9Y3F1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.57■□□□□ 0.4
Q9Y3F1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Q9Y3F1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9Y3F1 AC011477.6-201ENST00000604980 1927 ntBASIC17.57■□□□□ 0.4
Q9Y3F1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.56■□□□□ 0.4
Q9Y3F1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.56■□□□□ 0.4
Q9Y3F1 C2orf27AP3-201ENST00000434123 579 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 GAPDHP40-201ENST00000505218 1006 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.56■□□□□ 0.4
Q9Y3F1 AC015910.1-201ENST00000579400 975 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 AC010328.2-201ENST00000597698 1111 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 AC244669.2-201ENST00000612320 853 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.56■□□□□ 0.4
Q9Y3F1 AL354718.3-201ENST00000616414 581 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 CR382287.1-201ENST00000623954 586 ntBASIC17.56■□□□□ 0.4
Q9Y3F1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.56■□□□□ 0.4
Q9Y3F1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.56■□□□□ 0.4
Q9Y3F1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q9Y3F1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms