Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPA4Q9UI42 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPA4Q9UI42 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPA4Q9UI42 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 Z93015.1-201ENST00000451718 390 ntBASIC18.15■□□□□ 0.5
CPA4Q9UI42 AC022137.2-201ENST00000503482 481 ntBASIC18.15■□□□□ 0.5
CPA4Q9UI42 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.15■□□□□ 0.5
CPA4Q9UI42 MIR4741-201ENST00000579822 90 ntBASIC18.15■□□□□ 0.5
CPA4Q9UI42 AC106872.11-201ENST00000605838 421 ntBASIC18.15■□□□□ 0.5
CPA4Q9UI42 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.15■□□□□ 0.5
CPA4Q9UI42 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPA4Q9UI42 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPA4Q9UI42 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.14■□□□□ 0.5
CPA4Q9UI42 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.14■□□□□ 0.5
CPA4Q9UI42 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPA4Q9UI42 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CPA4Q9UI42 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CPA4Q9UI42 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 AL592424.1-201ENST00000563624 1536 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 NOC2LP2-201ENST00000407594 1944 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 FAM197Y7-201ENST00000432892 766 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 AC245100.5-201ENST00000452108 331 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 AC025279.2-201ENST00000569730 653 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 AL008638.5-201ENST00000623814 1298 ntBASIC18.14■□□□□ 0.49
CPA4Q9UI42 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPA4Q9UI42 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
CPA4Q9UI42 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.13■□□□□ 0.49
CPA4Q9UI42 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPA4Q9UI42 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms