Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL20A1Q9P218 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 AC006449.5-201ENST00000610658 2098 ntBASIC18.06■□□□□ 0.48
COL20A1Q9P218 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL20A1Q9P218 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.06■□□□□ 0.48
COL20A1Q9P218 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL20A1Q9P218 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL20A1Q9P218 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL20A1Q9P218 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COL20A1Q9P218 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL20A1Q9P218 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 AC018695.7-201ENST00000624587 2492 ntBASIC18.05■□□□□ 0.48
COL20A1Q9P218 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 TOMM22P5-201ENST00000416399 439 ntBASIC18.05■□□□□ 0.48
COL20A1Q9P218 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 TMEM14DP-201ENST00000422205 345 ntBASIC18.05■□□□□ 0.48
COL20A1Q9P218 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 RPSAP52-203ENST00000622976 1023 ntBASIC18.05■□□□□ 0.48
COL20A1Q9P218 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.05■□□□□ 0.48
COL20A1Q9P218 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL20A1Q9P218 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 OR8S1-201ENST00000310194 1080 ntBASIC18.04■□□□□ 0.48
COL20A1Q9P218 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL20A1Q9P218 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL20A1Q9P218 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 SLED1-202ENST00000512051 380 ntBASIC18.03■□□□□ 0.48
COL20A1Q9P218 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms