Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 MIR346-201ENST00000362234 95 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 FAM220BP-201ENST00000377689 816 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 HLA-H-201ENST00000383620 1096 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 LINC01225-203ENST00000563550 1244 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC061975.2-201ENST00000581722 295 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CALYQ9NYX4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 PRAL-201ENST00000624952 3286 ntBASIC13.35□□□□□ -0.27
CALYQ9NYX4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CALYQ9NYX4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 BX842568.4-201ENST00000421222 227 ntBASIC13.34□□□□□ -0.27
CALYQ9NYX4 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 MIR3687-2-201ENST00000577708 61 ntBASIC13.34□□□□□ -0.27
CALYQ9NYX4 MIR3687-1-201ENST00000614492 61 ntBASIC13.34□□□□□ -0.27
CALYQ9NYX4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms