Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 AL139010.1-201ENST00000454878 894 ntBASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 HLA-J-203ENST00000494367 1087 ntBASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 MIR4453-201ENST00000584019 89 ntBASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC4Q9NTJ3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMC4Q9NTJ3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.64■□□□□ 0.9
SMC4Q9NTJ3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 AC105021.1-202ENST00000570572 669 ntBASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 AC011477.6-201ENST00000604980 1927 ntBASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMC4Q9NTJ3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 AC026979.3-201ENST00000607315 403 ntBASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 AC006538.3-201ENST00000612495 578 ntBASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
SMC4Q9NTJ3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 AL512356.2-201ENST00000546955 174 ntBASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 AC007967.4-201ENST00000614700 386 ntBASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC4Q9NTJ3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms