Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HOMER3Q9NSC5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 VN2R19P-201ENST00000442399 1052 ntBASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOMER3Q9NSC5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AP001282.1-201ENST00000531301 1499 ntBASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AC092474.2-201ENST00000424288 719 ntBASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AL009183.1-201ENST00000603760 355 ntBASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FAM215A-202ENST00000632077 792 ntBASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AP002414.2-201ENST00000591780 3365 ntBASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOMER3Q9NSC5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms