Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 MIR600HG-201ENST00000449175 5984 ntBASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AP001282.1-201ENST00000531301 1499 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 HNRNPDP1-201ENST00000439535 754 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 FAM197Y8-203ENST00000450145 560 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AF186996.4-201ENST00000467186 377 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AC109635.5-201ENST00000533593 962 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AC012640.2-201ENST00000561606 901 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 IFNL4P1-201ENST00000607083 540 ntBASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE2Q9NRR3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms