Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AP006294.1-201ENST00000415407 339 ntBASIC16.66■□□□□ 0.26
HPS4Q9NQG7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 GIMAP3P-201ENST00000495150 836 ntBASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.66■□□□□ 0.26
HPS4Q9NQG7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 PCGF3-213ENST00000620529 1899 ntBASIC16.66■□□□□ 0.26
HPS4Q9NQG7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.66■□□□□ 0.26
HPS4Q9NQG7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 ATP5G2P4-201ENST00000442175 420 ntBASIC16.65■□□□□ 0.26
HPS4Q9NQG7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 RN7SL752P-201ENST00000463779 287 ntBASIC16.65■□□□□ 0.26
HPS4Q9NQG7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AC055876.2-201ENST00000531834 546 ntBASIC16.65■□□□□ 0.26
HPS4Q9NQG7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AC132938.2-201ENST00000579188 680 ntBASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 AL591163.1-201ENST00000641757 987 ntBASIC16.65■□□□□ 0.26
HPS4Q9NQG7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS4Q9NQG7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
HPS4Q9NQG7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.64■□□□□ 0.26
HPS4Q9NQG7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms