Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 REXO1L8P-201ENST00000604378 1897 ntBASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKKSQ9NPJ1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 TEX28P1-201ENST00000613479 1221 ntBASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 TEX28P2-201ENST00000617764 1221 ntBASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKKSQ9NPJ1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKKSQ9NPJ1 RPL37AP1-201ENST00000412502 279 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms