Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 LAGE3P1-201ENST00000425356 484 ntBASIC19.84■□□□□ 0.77
UPF2Q9HAU5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 RPS15P9-201ENST00000494093 319 ntBASIC19.84■□□□□ 0.77
UPF2Q9HAU5 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.84■□□□□ 0.77
UPF2Q9HAU5 FOSL1P1-201ENST00000511041 816 ntBASIC19.84■□□□□ 0.77
UPF2Q9HAU5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.83■□□□□ 0.77
UPF2Q9HAU5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF2Q9HAU5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 AC138035.3-201ENST00000622706 2791 ntBASIC19.82■□□□□ 0.76
UPF2Q9HAU5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 AC008608.2-201ENST00000606089 416 ntBASIC19.82■□□□□ 0.76
UPF2Q9HAU5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF2Q9HAU5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms