Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AC140113.3-201ENST00000605663 199 ntBASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AL353135.1-201ENST00000606729 504 ntBASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AL592071.1-201ENST00000611956 408 ntBASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 CICP8-201ENST00000455800 2813 ntBASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 NCF1C-201ENST00000438382 1427 ntBASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC092135.3-201ENST00000624151 1846 ntBASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.17□□□□□ -0.14
SLIRPQ9GZT3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms