Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MTX1P1-201ENST00000440904 838 ntBASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 RPSAP36-202ENST00000494591 1261 ntBASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 EEF1DP1-201ENST00000585891 896 ntBASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 KRT8P35-201ENST00000483942 1338 ntBASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 AL590640.2-201ENST00000457038 527 ntBASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 AKR7A2P1-201ENST00000460134 915 ntBASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 SCARNA20.5-201ENST00000516991 142 ntBASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 AC006453.4-201ENST00000636949 1252 ntBASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP4Q9C0A0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ME2P1-201ENST00000426028 1970 ntBASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 AC138028.6-201ENST00000616106 1482 ntBASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 CD8B2-202ENST00000417670 633 ntBASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 RNA5SP486-201ENST00000515961 83 ntBASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ACTG1P17-201ENST00000558391 1119 ntBASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 AC244452.3-201ENST00000636814 210 ntBASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP4Q9C0A0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 MIR1202-201ENST00000408529 83 ntBASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 HOMER2P2-201ENST00000451621 847 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms