Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TMBIM7P-203ENST00000641617 1718 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 LINC00528-201ENST00000600723 2160 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 SEC63P1-201ENST00000425785 1258 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 POU5F1P6-201ENST00000466990 990 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AC006518.1-201ENST00000541449 943 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AC133561.5-201ENST00000635547 218 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 CICP23-201ENST00000605013 2741 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AC079781.5-202ENST00000641784 3743 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 AL031731.1-201ENST00000642131 2094 ntBASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP4Q9BWG4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 AC117489.1-201ENST00000625169 3217 ntBASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP4Q9BWG4 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms